Associate professor
Academic disciplines: 
Reception Hours: 

Office hours are online and by appointment at

If you need an in-person meeting, send an email.

U14, Piano: P02, Stanza: 2041
Viale Sarca 336 - 20126 MILANO


  • Bonizzoni, P., Della Vedova, G., Pirola, Y., Previtali, M., & Rizzi, R. (2021). Computing the multi-string BWT and LCP array in external memory. THEORETICAL COMPUTER SCIENCE, 862(16 March 2021), 42-58.
  • Ciccolella, S., Ricketts, C., Soto Gomez, M., Patterson, M., Silverbush, D., Bonizzoni, P., et al. (2021). Inferring Cancer Progression from Single-Cell Sequencing while Allowing Mutation Losses. BIOINFORMATICS, 37(3 (1 February 2021)), 326-333 [10.1093/bioinformatics/btaa722].
  • Ciccolella, S., Bernardini, G., Denti, L., Bonizzoni, P., Previtali, M., & Vedova, G. (2021). Triplet-based similarity score for fully multi-labeled trees with poly-occurring labels. BIOINFORMATICS, 37(2 (January 2021)), 178-184 [10.1093/bioinformatics/btaa676].
  • Denti, L., Pirola, Y., Previtali, M., Ceccato, T., Della Vedova, G., Rizzi, R., et al. (2021). Shark: fishing relevant reads in an RNA-Seq sample. BIOINFORMATICS, 37(4), 464-472 [10.1093/bioinformatics/btaa779].
  • Ciccolella, S., Soto Gomez, M., Patterson, M., Della Vedova, G., Hajirasouliha, I., & Bonizzoni, P. (2020). gpps: an ILP-based approach for inferring cancer progression with mutation losses from single cell data. BMC BIOINFORMATICS, 21(Suppl 1), 413 [10.1186/s12859-020-03736-7].